Publications of Thomas Manke

Thomas-Chollier, M.; Hufton, A.; Heinig, M.; O'Keeffe, S.; El Masri, N.; Roider, H. G.; Manke, T.; Vingron, M.: Transcription factor binding predictions using TRAP for the analysis of ChIP-seq data and regulatory SNPs. Nature Protocols 6, pp. 1860 - 1869 (2011)

Warnatz, H.-J.; Querfurth, R.; Guerasimova, A.; Cheng, X.; Haas, S. A.; Hufton, A. L.; Manke, T.; Vanhecke, D.; Nietfeld, W.; Vingron, M. et al.; Janitz, M.; Lehrach, H.; Yaspo, M.-L.: Functional analysis and identification of cis-regulatory elements of human chromosome 21 gene promoters. Nucleic Acids Research 38, pp. 6112 - 6123 (2010)

Hov, J. R.; Keitel, V.; Laerdahl, J. K.; Spomer, L.; Ellinghaus, E.; Elsharawy, A.; Melum, E.; Boberg, K. M.; Manke, T.; Balschun, T. et al.; Schramm, C.; Bergquist, A.; Weismüller, T.; Gotthardt, D.; Rust, C.; Henckaerts, L.; Onnie, C. M.; Weersma, R. K.; Sterneck, M.; Teufel, A.; Runz, H.; Stiehl, A.; Ponsioen, C. Y.; Wijmenga, C.; Vatn, M. H.; Stokkers, P. C. F.; Vermeire, S.; Mathew, C. G.; Lie, B. A.; Beuers, U.; Manns, M. P.; Schreiber, S.; Schrumpf, E.; Häussinger, D.; Franke, A.; Karlsen, T. H.: Mutational Characterization of the Bile Acid Receptor TGR5 in Primary Sclerosing Cholangitis. PLoS ONE 5, p. e12403 - e12403 (2010)

Schaefer, A.; Richter, G. M.; Nothnagel, M.; Manke, T.; Dommisch, H.; Jacobs, G.; Arlt, A.; Rosenstiel, P.; Noack, B.; Groessner-Schreiber, B. et al.; Søren, J.; Loos, B. G.; Schreiber, S.: A genome-wide association study identifies GLT6D1 as a susceptibility locus for periodontitis. Human Molecular Genetics 29, pp. 553 - 562 (2010)

Warnatz, H.-J.; Querfurth, R.; Guerasimova, A.; Cheng, X.; Haas, S. A.; Hufton, A. L.; Manke, T.; Vanhecke, D.; Nietfeld, W.; Vingron, M. et al.; Janitz, M.; Lehrach, H.; Yaspo, M.-L.: Functional analysis and identification of cis-regulatory elements of human chromosome 21 gene promoters.

Arrigoni, L.; Ferrari, F.; Weller, J.; Bella, C.; Bönisch, U.; Manke, T.: AutoRELACS: Automated Generation And Analysis of Ultra-parallel ChIP-seq. Scientific Reports 10 p. 12400 (2020)

Hohl, T.; Bönisch, U.; Manke, T.; Arrigoni, L.: Enhancing single-cell ATAC sequencing with formaldehyde fixation, cryopreservation, and multiplexing for flexible analysis. bioRxiv: the preprint server for biology (2024)